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Keck Home Page > Biostatistics Resource > Software

SOFTWARE FOR FREE DOWNLOAD

Computer programs developed in Hongyu's Lab of Statistical Genetics

Gene Array Data Analysis

BCLUST
A program to assess reliability of gene clusters from expression data by using consensus tree and bootstrap resampling method
ReadMe (PDF), Related Paper, to download form

QAnalyzer 1.0
Statistical analysis of QuantArray data, including dye effect adjustment and ANOVA analysis.

ReadMe (PDF), to download form

GProcesser 1.0
Statistical analysis of GenePix data, including dye effect adjustment and ANOVA analysis.

ReadMe (PDF), to download form

More Programs developed in Hongyu's Lab,


MicroArray Data Analysis Softwares From Other Sources

Terry Speed's Group at UC Berkely Some R Packages for Microarray Analysis

Tibshirani's Lab at Stanford University SAM: Significance Analysis of Microarrays

Cluster from Gavin Sherlock at Stanford University

ScanAnalyze, Cluster and TreeView from Mike Eisen Lab

Gary Churchill's Statistical Genetics Group in the Jackson Laboratory ANOVA programs for microarray data

J-Express at MolMine

 

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Last modified: 30-Aug-2005 (GB)