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Keck Home Page > Small Scale Peptide Synthesis > Purification

Purification of Synthetic Peptides

Crude peptides are purified by reverse phase HPLC on a YMC, C-18 column (ODS-A, 2.0 cm x  25 cm, 120 angstrom pore size, 5 micron particle size) that is equilibrated in 0.05% TFA at a flow rate of 7.0 ml/min. The standard linear gradient increases from 0% to 100% acetonitrile over 300 min. Generally, however, only a portion of this gradient (centered around the expected acetonitrile concentration needed for elution) is run. To ensure that the highest purity fractions are pooled, aliquots of peak fractions are subjected to matrix assisted laser desorption ionization mass spectrometry (MALDI-MS) and analytical HPLC, which provides higher resolution than can be attained on our preparative HPLC. After pooling the highest purity fractions together, they are lyophilized to dryness.

 

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Last modified: 22-May-2002 (GB)